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MOLECULAR BIOLOGY: WORKING WITH PROTEINS

ENZYMATIC ASSAY: OTHER

PLATE ASSAY FOR STAINING OF CARBOXYPEPTIDASE Y POSITIVE YEAST COLONIES

Plate Assay for Staining of Carboxypeptidase Y Positive Yeast Colonies
Contributor: The Laboratory of Jasper Rine at the University of California, Berkeley
 
Overview
Dimethylformamide permeabilizes the cells. Carboxypeptidase Y in the cells cleaves the ester linkage in N-acetyl-DL-phenylalanine β-naphthyl ester. Free β-naphthol then reacts with the diazonium salt of Fast Garnet GBC to produce an insoluble red dye.
 
Procedure
1. Grow colonies or patches of colonies on YPD plates (see Hint #2).

2. Carefully pour the Overlay Mix over the surface of the plate to completely cover the cells.

3. After the agar hardens in 5 to 10 minutes, carefully flood the surface with fresh Garnet GBC solution.

4. Color will develop in 5 to 15 minutes.

5. Wild-type strains will turn red whereas carboxypeptidase Y-negative strains will appear yellow or pink. If color development takes longer than 30 minutes the Garnet solution is not fresh.

Solutions
Garnet GBC Solution   Prepared in 0.1 M Tris
Prepare just before use
5 mg/ml Fast Garnet GBC Sulfate Salt
0.1M Tris-HCl, pH 7.4
Overlay Mix   4 ml of 0.6% Molten Agar
2.5 ml Naphthyl-Ester
Keep solution at 50°C until use.
0.6% Molten Agar   Heat until liquid, keep at 55°C
0.6% Agar
Naphthyl-Ester   Prepared in Dimethylfomamide (CAUTION! see Hint #1)
1 mg/ml N-acetyl-DL-Phenylalanine β-Naphthyl Ester
10 g/l Yeast Extract   Autoclave 20 min, cool to room temperature
20 g/l Peptone
20 g/l Glucose (Dextrose)
 
BioReagents and Chemicals
Glucose
Fast Garnet GBC Sulfate Salt
Dimethylfomamide
N-Acetyl-DL-Phenylalanine beta-Naphthyl Ester
Yeast Extract
Dextrose
Peptone
Tris-HCl
Agar
 
Protocol Hints
1.CAUTION! This substance is a biohazard. Consult this agent's MSDS for proper handling instructions.

2. Three days for colonies to grow and one day for colony patches is usually sufficient.

   


Cited in http://www.bio.com/protocolstools/browsdesc.jhtml